High-Protein Pepperoni Breakfast Cups

Featured in: Everyday Home Favorites

These savory breakfast cups combine eggs, Greek yogurt, and Italian herbs with pepperoni, mozzarella, and vegetables for a protein-rich start to your day. Baked in a muffin tin, they're portable, customizable, and perfect for meal prep.

Updated on Tue, 10 Feb 2026 18:56:21 GMT
A close-up of High-Protein Pepperoni Breakfast Cups with golden tops and melted mozzarella in a muffin tin. Pin it
A close-up of High-Protein Pepperoni Breakfast Cups with golden tops and melted mozzarella in a muffin tin. | tastysfenj.com

Start your day with a protein-packed twist on a classic favorite with these High-Protein Pepperoni Breakfast Cups. These savory mini frittatas are loaded with pepperoni, melted mozzarella, and classic pizza flavors, making them the perfect on-the-go breakfast for busy mornings. By combining the fluffiness of eggs with the bold zest of Italian herbs and pizza sauce, you get a satisfying meal that feels like a treat while staying low-carb and high-protein.

A close-up of High-Protein Pepperoni Breakfast Cups with golden tops and melted mozzarella in a muffin tin. Pin it
A close-up of High-Protein Pepperoni Breakfast Cups with golden tops and melted mozzarella in a muffin tin. | tastysfenj.com

Whether you are following a low-carb diet or just looking for a delicious way to change up your egg routine, these muffin-tin breakfast cups are incredibly versatile. They pack 135 calories per cup and offer a savory profile that both adults and kids will enjoy.

Ingredients

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  • Egg Mixture: 6 large eggs, 1/2 cup plain Greek yogurt (unsweetened), 1/4 cup milk, 1/4 tsp salt, 1/4 tsp black pepper, 1/2 tsp dried oregano, 1/2 tsp dried basil.
  • Filling: 3/4 cup shredded mozzarella cheese, 1/2 cup mini pepperoni slices (or regular pepperoni, chopped), 1/4 cup finely diced red bell pepper, 2 tbsp finely diced red onion, 2 tbsp grated Parmesan cheese, 2 tbsp pizza sauce (plus extra for serving, optional).

Instructions

Step 1: Prep
Preheat your oven to 375°F (190°C). Grease a 6-cup muffin tin thoroughly or line it with silicone liners for easy removal.
Step 2: Whisk Egg Mixture
In a medium mixing bowl, whisk together the eggs, plain Greek yogurt, milk, salt, black pepper, dried oregano, and dried basil until the mixture is smooth.
Step 3: Prepare Filling
In a separate bowl, combine the shredded mozzarella, pepperoni slices, diced red bell pepper, red onion, Parmesan cheese, and pizza sauce.
Step 4: Assemble
Evenly divide the filling mixture among the 6 muffin cups. Pour the egg mixture over the filling, filling each cup about 3/4 full.
Step 5: Mix and Bake
Use a fork to gently stir each cup to distribute the filling evenly. Bake for 18–20 minutes, or until the centers are just set and the tops appear lightly golden.
Step 6: Cool and Serve
Allow the cups to cool for 5 minutes before removing them from the tin. Serve warm, optionally with extra pizza sauce for dipping.

Zusatztipps für die Zubereitung

To ensure the best results, use a whisk to fully incorporate the Greek yogurt into the eggs, which creates a creamier texture. Using silicone liners is highly recommended to prevent the cheese and eggs from sticking to the muffin tin.

Varianten und Anpassungen

For a vegetarian version, omit the pepperoni and substitute it with sautéed mushrooms or fresh spinach. You can also experiment with different cheeses, such as substituting cheddar or provolone for the mozzarella to change the flavor profile.

Serviervorschläge

Serve these breakfast cups warm with a side of extra pizza sauce for dipping. They are excellent for on-the-go snacking or as a component of a larger brunch spread. If you have leftovers, store them in the refrigerator for up to 4 days and reheat gently in the microwave.

Savory High-Protein Pepperoni Breakfast Cups on a white plate with a small bowl of marinara for dipping. Pin it
Savory High-Protein Pepperoni Breakfast Cups on a white plate with a small bowl of marinara for dipping. | tastysfenj.com

Enjoy these delicious, pizza-inspired egg cups as a convenient and healthy way to fuel your morning. With their high protein content and savory taste, they are sure to become a staple in your breakfast rotation.

Recipe Questions & Answers

Can I make these breakfast cups ahead of time?

Yes, these cups store well in the refrigerator for up to 4 days. Reheat gently in the microwave for 30-60 seconds before serving.

What can I substitute for the pepperoni?

For a vegetarian option, replace pepperoni with sautéed mushrooms, spinach, or diced bell peppers. You can also use cooked crumbled bacon or sausage.

Can I freeze these breakfast cups?

Absolutely. Once cooled, wrap individually in plastic wrap and freeze for up to 2 months. Thaw overnight in the refrigerator before reheating.

How do I know when they're done baking?

The cups are ready when the centers are just set and the tops are lightly golden, usually 18-20 minutes at 375°F. They should not be jiggly in the middle.

Can I use a regular 12-cup muffin tin?

Yes, simply double the ingredients to make 12 cups. The baking time remains the same. Alternatively, fill the remaining cups with water for even heating.

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High-Protein Pepperoni Breakfast Cups

Savory mini cups with pepperoni, mozzarella, and pizza flavors baked in muffin tins for a protein-packed morning meal.

Prep time
15 min
Time to cook
20 min
Overall time
35 min
Created by Benjamin Holloway


Skill level Easy

Cuisine type American

Makes 3 Number of servings

Dietary details Low in carbs

What You'll Need

Egg Mixture

01 6 large eggs
02 1/2 cup plain Greek yogurt, unsweetened
03 1/4 cup whole milk
04 1/4 teaspoon salt
05 1/4 teaspoon black pepper
06 1/2 teaspoon dried oregano
07 1/2 teaspoon dried basil

Filling

01 3/4 cup shredded mozzarella cheese
02 1/2 cup mini pepperoni slices
03 1/4 cup red bell pepper, finely diced
04 2 tablespoons red onion, finely diced
05 2 tablespoons grated Parmesan cheese
06 2 tablespoons pizza sauce

Directions

Step 01

Prepare the muffin tin: Preheat oven to 375°F. Grease a 6-cup muffin tin or line with silicone liners.

Step 02

Mix egg base: In a medium mixing bowl, whisk together eggs, Greek yogurt, milk, salt, pepper, oregano, and basil until smooth and well combined.

Step 03

Combine filling ingredients: In a separate bowl, combine mozzarella, pepperoni, bell pepper, red onion, Parmesan, and pizza sauce.

Step 04

Distribute filling: Evenly divide the filling mixture among the 6 muffin cups, distributing ingredients as evenly as possible.

Step 05

Add egg mixture: Pour the egg mixture over the filling in each cup until about 3/4 full. Use a fork to gently stir each cup to distribute the filling throughout.

Step 06

Bake: Bake for 18 to 20 minutes, or until the centers are just set and the tops are lightly golden brown.

Step 07

Cool and serve: Cool in the tin for 5 minutes before removing. Serve warm with additional pizza sauce if desired.

What You'll Need

  • 6-cup muffin tin
  • Mixing bowls
  • Whisk
  • Measuring cups and spoons
  • Fork

Allergy info

Review each item for allergens, and talk to a doctor if you're unsure.
  • Contains eggs and dairy products
  • May contain gluten depending on pepperoni and pizza sauce brands; verify packaging for gluten-containing ingredients

Nutrition info (per serving)

Nutrition details are for your reference only and don't replace healthcare guidance.
  • Calories count: 135
  • Fat content: 9 g
  • Carbohydrates: 2 g
  • Protein amount: 11 g

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